PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS65935.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family CAMTA
Protein Properties Length: 199aa    MW: 22565.2 Da    PI: 7.2821
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS65935.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1183.42.6e-57171333118
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 +e ++rwl++ ei++iL n++k ++++e++ +p sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v++l+cyYah+een++fqrr+yw
  EPS65935.1  17 SEvQHRWLRPAEICEILRNYHKLHISSEAPAKPVSGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDMLHCYYAHGEENENFQRRSYW 115
                 5559*********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhylevk 118
                 lLe++l +iv+vhylevk
  EPS65935.1 116 LLEQDLMHIVFVHYLEVK 133
                 ***************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.36812138IPR005559CG-1 DNA-binding domain
SMARTSM010764.4E-7815133IPR005559CG-1 DNA-binding domain
PfamPF038594.2E-5119132IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MDETGSGFRF DIEQILSEVQ HRWLRPAEIC EILRNYHKLH ISSEAPAKPV SGSVFLFDRK  60
VLRYFRKDGH NWRKKKDGKT VKEAHEKLKV GSVDMLHCYY AHGEENENFQ RRSYWLLEQD  120
LMHIVFVHYL EVKGSKASTS SARNSDGVLN SGMDGSVSST FCGTGPSSPL SSAYEDGESD  180
GNQQARSKFC PYPESPQAV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828340.11e-101PREDICTED: calmodulin-binding transcription activator 2 isoform X1
RefseqXP_012828341.11e-101PREDICTED: calmodulin-binding transcription activator 2 isoform X1
SwissprotQ9FY741e-84CMTA1_ARATH; Calmodulin-binding transcription activator 1
TrEMBLS8CGJ11e-149S8CGJ1_9LAMI; Calmodulin-binding transcription activator 2 (Fragment)
STRINGSolyc01g105230.2.15e-86(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14489811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.28e-86ethylene induced calmodulin binding protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]